CDS

Accession Number TCMCG007C02538
gbkey CDS
Protein Id XP_018511107.2
Location join(15020668..15020748,15021061..15021147,15021295..15021366,15021368..15021388,15021605..15021685,15021779..15021973,15022060..15024171,15024410..15024556,15024639..15025021,15025118..15025253)
Gene LOC103845756
GeneID 103845756
Organism Brassica rapa

Protein

Length 1104aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018655591.2
Definition LOW QUALITY PROTEIN: PH, RCC1 and FYVE domains-containing protein 1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category T
Description guanyl-nucleotide exchange factor activity
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000726        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005085        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005814        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031625        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032182        [VIEW IN EMBL-EBI]
GO:0032183        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044389        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044450        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051020        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGGACTAGGAAGGGAAGAATGGCGTCGGATCTTAGCAGAGCTGATCCTGTAGTTGCGAGGGATATTGATATTGAGCAGGCTGTCACTGCCCTGAAAAAGGGAGCTTATTTGCTCAAGTATGGAACAAGGGGAAAGCCTAAGTTCTGTCCTTTTCGCCTTTCTAGTGATGAGTCTGTTTTGATATGGTTCTCCGGGAAGGAAGAGAAACATTTGAAGCTGAGCCATGTTTCTAGGATCTGCATATCTGGCCAGCGCACTCCTATTTTTCAGAGATGTCCACGTCCCGAGAAGGAATATCAATCCTTTTCGCTAATACACGACGAGAGGTCATTGGATTTGATATGCAAGGATAAAGATGAGGCTCAAGTGTGGTTTACTGGTTTAAAAGCCTTAATCTCCCGTTCCCATCAACGGAGATGGAGGACCGACTCAAGAAGTGATGAGACGCCATCCGAAGCTAACAGTCCCAGGACTTATACTCGGAGAAGCTCCCCTTTACATTCTCCCTTTAGCAGCAATGATAGTTTCCTTAAAGATGGCTCTAATCACCATTGTCTTCACAGTCCGTATGAGAGCCCGCCTAAGAATGGCATTGGCAAGGCATTTTCAGACATGACATTGTATGCACTTCCTCCAAAAGGATATTTTCCTTCAGATCCGGCAAGTATCTCAGTTCACTCTTTGTCATCCGGAGCCTCGGATACCATACACGGTATGGATGCTTTTAGAGTTAGTCTGTCAAGTGCTATTAGTTCTTCGAGCCATGGTTCTGGTCATGATGATGGAGATGCGTTGGGAGACGTTTTCATTTGGGGAGAAGGAATAGGTGAAGGTGTTTTGGGTGGTGGAAACCATATAGTTGGAAGTTCGTTTGAGATCAAAATGGATTCCTTAGTGCCAAAAGCTTTAGAATCTTCTATAGTACTTGATGTCCAGAATATTGCTTGTGGTGAACAGCATGCTGTTCTTGTAACAAAACAAGGAGAAAGTTTTTCCTGGGGAGAGGAATCTGAGGGTAGGCTTGGCCATGGTGTAGATTCCAATGTTCAACATCCAAAGCTTATTGATGCACTTAGTACCACTAACATTGAGCTTGTAGCATGTGGCGAATACCATAGTTGTGCAGTTTCTCTATCAGGGGATTTATATACCTGGGGTAAAGGAGATTTTGGTATTCTGGGACATGGAAATGAAGTCAGCCACTGGATCCCGAAAAGAGTTAACTTTTTGATGGAAGGGATACATGTTTCATCTATCGCTTGTGGACCTTACCACACAGCTGTTGTGACTTCTGCTGGGCAGTTGTTCACTTTCGGTGATGGGACCTTTGGTGTTTTGGGCCATGGAGACAGGAAAAGTGTTTTCATACCCAGAGAGGTAGACTCCTTGAAAGGTCTTCGCACTGTCCGGGCTGCCTGTGGTATATGGCACACAGCCGCAGTTGTGGAAGTCATGGTCGGAAGCTCGAGCTCTAGTAACTGCTCTTCAGGAAAGCTCTTTACATGGGGTGATGGTGACAAGAATCGTCTTGGTCACGGTGACAAAGAACTGAAACTTGTGCCTACCTGTGTTGCAGCTCTTGTAGAACCTAATTTTTGTCAAGTTGCGTGTGGACATAGCCTAACAGTTGCACTAACAACATCGGGCCATGTCTATACTATGGGTAGTCCTGTTTATGGCCAGCTCGGAAACCCACATGCTGATGGAAAGTTACCAGCCCGCGTTGAAGGTAAACTTCATAAGGGTTTTGTCGAAGAAATTGCTTGCGGAGCTTATCATGTTGCAGTTTTAACTTCGAGGACTGAGGTTTACACTTGGGGAAAAGGATCAAACGGTAGACTAGGCCATGGGGATGTAGACGATAGAAACTCGCCAACATTGGTTGAGTCGCTTAAGGATAAACAGGTGAAAACTATTGCATGTGGCTCTAACTTCACCGCAGCTGTCTGTCTTCACAAGTGGGCATCAGGGATGGATCAGTCAATGTGTTCAGGTTGCCGTCAGCCTTTCAATTTCAAGAGAAAGCGGCACAACTGCTATAACTGTGGACTTGTGTTTTGCCATTCCTGCAGTAATAAAAAGTCCCTGAAGGCTTGTATGGCACCGAACCCGAACAAACCATACCGAGTGTGTGACAAGTGTTTTAACAAATTGAAAAAGGCCACTGAAGCTGATGGATCATCTCATTCTTCCTTGAGCCGAAGAGAAAGTGTCAACCAGGGATCAGATGCAGTTGACAGAGACGAGAAGTTGGATTGTAGATCCGACGGACAGTTAGCTAGATTCTCATTGTTGGAGCCTATGAAGCAAGTGGACAGCCGAACCAAGAAGAACAAGAAATACGAATTTAATAGTAGTCGTGTCTCACCAATACCAAGTGGAGGCTCTCACCGAGGTTCACTGAACGTAACCAAGTCTTTTAATCCAACTTTCGGATCATCAAAGAAATTCTTCTCAGCGTCTGTTCCTGGTTCCCGAATTGTGTCTCGGGCAACTTCACCAATATCAAGACGCCTAAGCCCACCAGCTCGCTCAACAACGCCAACTCCCACTCTTTCAGGACTAACTACACCAAAAATTGTCGTAGATGATACCAAGAGAACCAATGATAACATAAGCCAGGAGGTGGTTATGCTAAGATCTCAAGTTGAAAGTCTTACACGGAAGGCACAGCTTCAAGAAGTTGAACTGGAAAGAACAACCAAACAGCTAAAGGAGGCACTAGCAATTGCTAGCGAAGAAACAGCGAGATGCAATGCAGCTAAAGATGTGATTAAATCACTTACCGCTCAGTTGAAAGACATGGCTGAAAGATTACCTGTTGGATCAGTTCGGACTATCAAGTCTCCTTCTCTTAATTCGTTTGGTTCCAGTCTTGATTACGTTTCCCCTTCGTCTAATACATTAAACCGTCCAAACAGTCGAGAAACTGATGCTGACGTCCCAAGCACCGTTCCAGTGTTTTCTAACGGGACCAGCACGCCTGTTTTTGATGGTGCAAGCTACCGACAGCAAGCGGATCATGCTGCTGAATCGATAAATAGAAACAGCACTCGAGCAAAAGAAAATGAACCCCGTAATGAAAATGAGTGGGTTGAAGAAGATGAGCCTGGTGTGTACATCACTCTCACAGCCTTAGCGGGAGGGGCAAGGGATCTCAAACGCGTCCGTTTCAGCCGAAAGAGGTTTAGCGAGAAACAAGCAGAAGAGTGGTGGGCAGAGAACAGAGGACGAGTTTGCGAACAATACAATGTACGTATAGTTGTTGACAAATCAAGTGTGGGTGTAGGAAGTGAAGACTTGGCTCATTAA
Protein:  
MWTRKGRMASDLSRADPVVARDIDIEQAVTALKKGAYLLKYGTRGKPKFCPFRLSSDESVLIWFSGKEEKHLKLSHVSRICISGQRTPIFQRCPRPEKEYQSFSLIHDERSLDLICKDKDEAQVWFTGLKALISRSHQRRWRTDSRSDETPSEANSPRTYTRRSSPLHSPFSSNDSFLKDGSNHHCLHSPYESPPKNGIGKAFSDMTLYALPPKGYFPSDPASISVHSLSSGASDTIHGMDAFRVSLSSAISSSSHGSGHDDGDALGDVFIWGEGIGEGVLGGGNHIVGSSFEIKMDSLVPKALESSIVLDVQNIACGEQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWIPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGIWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKNRLGHGDKELKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKLPARVEGKLHKGFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKTIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDKCFNKLKKATEADGSSHSSLSRRESVNQGSDAVDRDEKLDCRSDGQLARFSLLEPMKQVDSRTKKNKKYEFNSSRVSPIPSGGSHRGSLNVTKSFNPTFGSSKKFFSASVPGSRIVSRATSPISRRLSPPARSTTPTPTLSGLTTPKIVVDDTKRTNDNISQEVVMLRSQVESLTRKAQLQEVELERTTKQLKEALAIASEETARCNAAKDVIKSLTAQLKDMAERLPVGSVRTIKSPSLNSFGSSLDYVSPSSNTLNRPNSRETDADVPSTVPVFSNGTSTPVFDGASYRQQADHAAESINRNSTRAKENEPRNENEWVEEDEPGVYITLTALAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVCEQYNVRIVVDKSSVGVGSEDLAH